Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein hfq | SAMN05444679_111125 | Not Available | Negative | 3316612 - 3316857 | 9030.87 |
| gtp-binding protein | SAMN05444679_111126 | Not Available | Negative | 3317042 - 3318388 | 49438.5 |
| beta-barrel assembly machine subunit bamb | SAMN05444679_111127 | Not Available | Negative | 3318407 - 3319549 | 39547.2 |
| putative negative regulator of rcsb-dependent stress response | SAMN05444679_111128 | Not Available | Negative | 3319546 - 3320241 | 25323.9 |
| histidyl-trna synthetase | SAMN05444679_111129 | Not Available | Negative | 3320248 - 3321558 | 47753.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN05444679_111130 | Not Available | Negative | 3321567 - 3322859 | 46410.6 |
| cytoskeleton protein rodz | SAMN05444679_111131 | Not Available | Negative | 3322856 - 3323794 | 31344.8 |
| type iv pilus assembly protein pilf | SAMN05444679_111132 | Not Available | Negative | 3323787 - 3324620 | 30788.2 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN05444679_111133 | Not Available | Negative | 3324625 - 3325785 | 42471.1 |
| nucleoside diphosphate kinase | SAMN05444679_111134 | Not Available | Negative | 3325805 - 3326224 | 15119.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
