Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-lyase | SAMN05444679_111115 | Not Available | Negative | 3306982 - 3308175 | 42748.4 |
| arac-type dna-binding protein | SAMN05444679_111116 | Not Available | Positive | 3308182 - 3309039 | 30923.2 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05444679_111117 | Not Available | Positive | 3309111 - 3309554 | 16199.0 |
| hypothetical protein | SAMN05444679_111118 | Not Available | Negative | 3309559 - 3310083 | 19554.4 |
| adenylosuccinate synthetase | SAMN05444679_111119 | Not Available | Negative | 3310233 - 3311564 | 48055.8 |
| atp phosphoribosyltransferase regulatory subunit | SAMN05444679_111120 | Not Available | Negative | 3311585 - 3312736 | 41403.5 |
| hypothetical protein | SAMN05444679_111121 | Not Available | Negative | 3312781 - 3312996 | 7795.71 |
| protease ftsh subunit hflc | SAMN05444679_111122 | Not Available | Negative | 3313064 - 3313963 | 33645.3 |
| protease ftsh subunit hflk | SAMN05444679_111123 | Not Available | Negative | 3313974 - 3315311 | 48297.9 |
| gtp-binding protein hflx | SAMN05444679_111124 | Not Available | Negative | 3315388 - 3316557 | 43420.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
