Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| assimilatory nitrite reductase (nad(p)h) small subunit | SAMN05444679_101318 | Not Available | Negative | 297966 - 298346 | 13295.0 |
| type iv pili methyl-accepting chemotaxis transducer n-term | SAMN05444679_101319 | Not Available | Negative | 298357 - 299163 | 29178.3 |
| assimilatory nitrite reductase (nad(p)h) large subunit precursor | SAMN05444679_101320 | Not Available | Negative | 299160 - 301592 | 89087.1 |
| serine/threonine protein phosphatase prpc | SAMN05444679_101321 | Not Available | Positive | 301651 - 303357 | 61879.0 |
| mfs transporter, nnp family, nitrate/nitrite transporter | SAMN05444679_101322 | Not Available | Negative | 303390 - 304667 | 44883.1 |
| two-component response regulator, amir/nast family, consists of rec and rna-binding antiterminator (antar) domains | SAMN05444679_101323 | Not Available | Positive | 304762 - 306198 | 51664.2 |
| nitrate/nitrite transport system atp-binding protein | SAMN05444679_101324 | Not Available | Negative | 306220 - 307053 | 30408.2 |
| nitrate/nitrite transport system permease protein | SAMN05444679_101325 | Not Available | Negative | 307050 - 307973 | 33191.1 |
| nitrate/nitrite transport system substrate-binding protein | SAMN05444679_101326 | Not Available | Negative | 307984 - 309228 | 45345.8 |
| antar domain-containing protein | SAMN05444679_101327 | Not Available | Negative | 309548 - 310849 | 47674.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
