Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromate transporter | SAMN05444679_111105 | Not Available | Positive | 3301292 - 3301891 | 21149.2 |
| predicted oxidoreductase | SAMN05444679_111106 | Not Available | Positive | 3301912 - 3302877 | 34156.4 |
| hypothetical protein | SAMN05444679_111107 | Not Available | Positive | 3302969 - 3303139 | 5757.28 |
| hsp20 family protein | SAMN05444679_111108 | Not Available | Positive | 3303261 - 3303698 | 16171.3 |
| molecular chaperone ibpa, hsp20 family | SAMN05444679_111109 | Not Available | Positive | 3303713 - 3304093 | 13683.2 |
| hypothetical protein | SAMN05444679_111110 | Not Available | Positive | 3304207 - 3304470 | 9783.2 |
| 23s rrna gm-2251 2'-o-methyltransferase | SAMN05444679_111111 | Not Available | Negative | 3304486 - 3305238 | 26294.8 |
| putative abc transport system atp-binding protein | SAMN05444679_111112 | Not Available | Negative | 3305260 - 3305961 | 24902.9 |
| acyl-coa thioesterase-1 | SAMN05444679_111113 | Not Available | Positive | 3306074 - 3306631 | 19533.8 |
| hypothetical protein | SAMN05444679_111114 | Not Available | Negative | 3306709 - 3306912 | 7432.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
