Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN05444679_11195 | Not Available | Positive | 3291510 - 3291956 | 16351.1 |
| hypothetical protein | SAMN05444679_11196 | Not Available | Negative | 3291975 - 3292847 | 32637.2 |
| uncharacterized radical sam protein ygiq | SAMN05444679_11197 | Not Available | Negative | 3292978 - 3295320 | 86688.8 |
| transcriptional regulator, marr family with acetyltransferase activity | SAMN05444679_11198 | Not Available | Positive | 3295486 - 3296439 | 35297.5 |
| 3-hydroxybutyrate dehydrogenase | SAMN05444679_11199 | Not Available | Negative | 3296429 - 3297211 | 27557.4 |
| nte family protein | SAMN05444679_111100 | Not Available | Negative | 3297315 - 3298514 | 43540.9 |
| chrd domain-containing protein | SAMN05444679_111101 | Not Available | Negative | 3298559 - 3299008 | 15164.3 |
| uncharacterized conserved protein, duf924 family | SAMN05444679_111102 | Not Available | Positive | 3299115 - 3299660 | 20051.4 |
| membrane protein | SAMN05444679_111103 | Not Available | Negative | 3299657 - 3300547 | 31735.4 |
| chromate transporter | SAMN05444679_111104 | Not Available | Positive | 3300625 - 3301212 | 20558.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
