Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | SAMN05444679_11185 | Not Available | Positive | 3283031 - 3283699 | 24933.9 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444679_11186 | Not Available | Negative | 3283709 - 3284533 | 28866.0 |
| uncharacterized conserved protein yeao, duf488 family | SAMN05444679_11187 | Not Available | Positive | 3284631 - 3285023 | 14471.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_11188 | Not Available | Negative | 3285119 - 3286021 | 32498.7 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_11189 | Not Available | Positive | 3286125 - 3287000 | 30297.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_11190 | Not Available | Negative | 3287007 - 3287987 | 33885.6 |
| hypothetical protein | SAMN05444679_11191 | Not Available | Positive | 3288082 - 3288591 | 17555.3 |
| pyridoxamine 5'-phosphate oxidase | SAMN05444679_11192 | Not Available | Positive | 3288588 - 3289940 | 48353.4 |
| hemerythrin hhe cation binding domain-containing protein | SAMN05444679_11193 | Not Available | Negative | 3289937 - 3290653 | 26181.5 |
| hypothetical protein | SAMN05444679_11194 | Not Available | Negative | 3290775 - 3291326 | 18115.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
