Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyhydroxyalkanoate synthase | SAMN05444679_11175 | Not Available | Negative | 3267975 - 3269444 | 52346.4 |
| nadh dehydrogenase | SAMN05444679_11176 | Not Available | Negative | 3269457 - 3270791 | 48375.5 |
| aerobic c4-dicarboxylate transport protein | SAMN05444679_11177 | Not Available | Negative | 3270823 - 3272166 | 47627.7 |
| lipoic acid synthetase | SAMN05444679_11178 | Not Available | Negative | 3272185 - 3273129 | 34514.5 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN05444679_11179 | Not Available | Negative | 3273140 - 3275422 | 81122.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_11180 | Not Available | Negative | 3275465 - 3276259 | 28715.6 |
| dihydrolipoamide dehydrogenase | SAMN05444679_11181 | Not Available | Negative | 3276271 - 3278037 | 61288.4 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05444679_11182 | Not Available | Negative | 3278051 - 3279646 | 54907.1 |
| pyruvate dehydrogenase e1 component | SAMN05444679_11183 | Not Available | Negative | 3279660 - 3282332 | 99531.6 |
| hypothetical protein | SAMN05444679_11184 | Not Available | Negative | 3282634 - 3282858 | 8065.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
