Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | SAMN05444679_11155 | Not Available | Positive | 3246374 - 3247273 | 33432.9 |
| peroxiredoxin | SAMN05444679_11156 | Not Available | Positive | 3247756 - 3248349 | 21303.4 |
| hypothetical protein | SAMN05444679_11157 | Not Available | Positive | 3248530 - 3249393 | 31692.8 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444679_11158 | Not Available | Positive | 3249414 - 3250973 | 55858.3 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05444679_11159 | Not Available | Positive | 3250970 - 3252535 | 55975.9 |
| membrane fusion protein, multidrug efflux system | SAMN05444679_11160 | Not Available | Positive | 3252542 - 3253615 | 37324.8 |
| hypothetical protein | SAMN05444679_11161 | Not Available | Positive | 3253641 - 3254279 | 22631.9 |
| aefr-like transcriptional repressor, c-terminal region | SAMN05444679_11162 | Not Available | Positive | 3254260 - 3255279 | 38101.3 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05444679_11163 | Not Available | Positive | 3255419 - 3255898 | 18121.8 |
| ubiquinol-cytochrome c reductase cytochrome b subunit | SAMN05444679_11164 | Not Available | Positive | 3255935 - 3257299 | 50707.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
