Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0271 protein | SAMN05444679_11135 | Not Available | Positive | 3226492 - 3227250 | 26372.0 |
| transcriptional regulator, arac family | SAMN05444679_11136 | Not Available | Negative | 3227319 - 3228062 | 28122.2 |
| transcriptional regulator, gntr family | SAMN05444679_11137 | Not Available | Positive | 3228152 - 3228796 | 23762.0 |
| 4-oxalocrotonate tautomerase | SAMN05444679_11138 | Not Available | Negative | 3228819 - 3229010 | 6863.29 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_11139 | Not Available | Negative | 3229208 - 3230089 | 31282.7 |
| glycine/d-amino acid oxidase | SAMN05444679_11140 | Not Available | Positive | 3230181 - 3231359 | 42728.8 |
| aldehyde dehydrogenase family protein | SAMN05444679_11141 | Not Available | Positive | 3231372 - 3231989 | 22311.2 |
| predicted atpase | SAMN05444679_11142 | Not Available | Positive | 3232443 - 3235313 | 103055.0 |
| transcriptional regulator | SAMN05444679_11143 | Not Available | Negative | 3235237 - 3238191 | 105848.0 |
| snoal-like domain-containing protein | SAMN05444679_11144 | Not Available | Negative | 3238231 - 3238692 | 16467.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
