Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | SAMN05444679_11125 | Not Available | Negative | 3217584 - 3218231 | 22679.4 |
| aspartate aminotransferase | SAMN05444679_11126 | Not Available | Negative | 3218262 - 3219521 | 44837.8 |
| regulator of rnase e activity rraa | SAMN05444679_11127 | Not Available | Negative | 3219518 - 3220180 | 23391.1 |
| regulator of rnase e activity rraa | SAMN05444679_11128 | Not Available | Negative | 3220177 - 3220845 | 23635.5 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_11129 | Not Available | Positive | 3220952 - 3221881 | 33369.0 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_11130 | Not Available | Negative | 3221908 - 3222804 | 32313.0 |
| nad(p)h dehydrogenase (quinone) | SAMN05444679_11131 | Not Available | Positive | 3223151 - 3223957 | 29938.4 |
| glycine/d-amino acid oxidase | SAMN05444679_11132 | Not Available | Positive | 3223991 - 3225166 | 42274.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_11133 | Not Available | Positive | 3225179 - 3225952 | 26396.8 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05444679_11134 | Not Available | Positive | 3225957 - 3226409 | 16517.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
