Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin carboxyl carrier protein | SAMN05444679_11115 | Not Available | Negative | 3209043 - 3209489 | 15882.0 |
| upf0271 protein | SAMN05444679_11116 | Not Available | Negative | 3209496 - 3210272 | 26959.6 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN05444679_11117 | Not Available | Negative | 3210304 - 3211284 | 34954.9 |
| sensor histidine kinase inhibitor, kipi family | SAMN05444679_11118 | Not Available | Negative | 3211281 - 3211943 | 23620.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_11119 | Not Available | Negative | 3211966 - 3212949 | 34490.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_11120 | Not Available | Negative | 3212984 - 3213961 | 34008.6 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444679_11121 | Not Available | Negative | 3214005 - 3215408 | 49080.7 |
| regulator of rnase e activity rraa | SAMN05444679_11122 | Not Available | Negative | 3215405 - 3216076 | 23150.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_11123 | Not Available | Positive | 3216178 - 3217116 | 34040.3 |
| hypothetical protein | SAMN05444679_11124 | Not Available | Negative | 3217138 - 3217536 | 14668.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
