Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated protein | SAMN05444679_101308 | Not Available | Negative | 287460 - 288116 | 24280.7 |
| microcin-processing peptidase 1. unknown type peptidase. merops family u62 | SAMN05444679_101309 | Not Available | Positive | 288175 - 289545 | 48320.9 |
| nudix domain-containing protein | SAMN05444679_101310 | Not Available | Negative | 289542 - 290006 | 16952.1 |
| hypothetical protein | SAMN05444679_101311 | Not Available | Negative | 290009 - 290473 | 16425.1 |
| ssu ribosomal protein s21p | SAMN05444679_101312 | Not Available | Negative | 290572 - 290784 | 8506.61 |
| hypothetical protein | SAMN05444679_101313 | Not Available | Negative | 290897 - 292099 | 42813.1 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05444679_101314 | Not Available | Negative | 292159 - 293289 | 42881.6 |
| uroporphyrin-iii c-methyltransferase | SAMN05444679_101315 | Not Available | Negative | 293369 - 294157 | 27360.2 |
| anthranilate phosphoribosyltransferase | SAMN05444679_101316 | Not Available | Negative | 294154 - 295068 | 32427.3 |
| assimilatory nitrate reductase (nadh) alpha subunit apoprotein | SAMN05444679_101317 | Not Available | Negative | 295155 - 297956 | 99732.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
