Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase | SAMN05444679_110240 | Not Available | Negative | 3190272 - 3191417 | 41579.9 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN05444679_110241 | Not Available | Negative | 3191426 - 3192214 | 27813.4 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN05444679_110242 | Not Available | Negative | 3192228 - 3192671 | 16525.5 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN05444679_110243 | Not Available | Negative | 3192668 - 3193654 | 34508.7 |
| periplasmic chaperone for outer membrane proteins skp | SAMN05444679_110244 | Not Available | Negative | 3193670 - 3194200 | 19769.5 |
| outer membrane protein assembly complex, yaet protein | SAMN05444679_110245 | Not Available | Negative | 3194200 - 3195426 | 44781.7 |
| hypothetical protein | SAMN05444679_1111 | Not Available | Negative | 3195427 - 3195521 | 3383.26 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_1112 | Not Available | Negative | 3195563 - 3196552 | 34732.2 |
| itaconate coa-transferase | SAMN05444679_1113 | Not Available | Negative | 3196583 - 3197761 | 42396.6 |
| acyl-coa dehydrogenase | SAMN05444679_1114 | Not Available | Negative | 3197779 - 3198939 | 43153.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
