Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna um-2552 2'-o-methyltransferase | SAMN05444679_110230 | Not Available | Negative | 3180483 - 3181151 | 24311.5 |
| putative rna-binding protein, yhby family | SAMN05444679_110231 | Not Available | Positive | 3181172 - 3181651 | 17699.9 |
| hypothetical protein | SAMN05444679_110232 | Not Available | Positive | 3181654 - 3182418 | 29914.7 |
| protein of unknown function | SAMN05444679_110233 | Not Available | Negative | 3182419 - 3182832 | 15144.0 |
| transcription elongation factor grea | SAMN05444679_110234 | Not Available | Negative | 3182841 - 3183320 | 17099.2 |
| 3-deoxy-d-manno-oct-2-ulosonic acid (kdo) hydroxylase | SAMN05444679_110235 | Not Available | Negative | 3183387 - 3184256 | 32696.2 |
| carbamoyl-phosphate synthase large subunit | SAMN05444679_110236 | Not Available | Negative | 3184267 - 3187503 | 117611.0 |
| carbamoyl-phosphate synthase small subunit | SAMN05444679_110237 | Not Available | Negative | 3187496 - 3188680 | 42342.9 |
| rna methyltransferase, trmh family | SAMN05444679_110238 | Not Available | Negative | 3188817 - 3189596 | 27184.8 |
| rnase hii | SAMN05444679_110239 | Not Available | Negative | 3189593 - 3190300 | 25250.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
