Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_110210 | Not Available | Positive | 3160800 - 3160982 | 6652.07 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN05444679_110211 | Not Available | Positive | 3160985 - 3161749 | 26807.0 |
| adenylate kinase | SAMN05444679_110212 | Not Available | Positive | 3161873 - 3162529 | 23633.4 |
| hypothetical protein | SAMN05444679_110213 | Not Available | Negative | 3162530 - 3163003 | 17253.8 |
| hypothetical protein | SAMN05444679_110214 | Not Available | Negative | 3163025 - 3163441 | 14796.7 |
| l-asparaginase | SAMN05444679_110215 | Not Available | Negative | 3163446 - 3164441 | 34555.4 |
| repressor lexa | SAMN05444679_110216 | Not Available | Positive | 3164516 - 3165190 | 24492.8 |
| hypothetical protein | SAMN05444679_110217 | Not Available | Positive | 3165306 - 3165614 | 11102.6 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444679_110218 | Not Available | Positive | 3165734 - 3166741 | 36863.8 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_110219 | Not Available | Positive | 3166738 - 3167910 | 40328.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
