Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpa | SAMN05444679_110200 | Not Available | Negative | 3151143 - 3153464 | 84802.9 |
| atp-dependent clp protease adaptor protein clps | SAMN05444679_110201 | Not Available | Negative | 3153519 - 3153950 | 16271.9 |
| isocitrate dehydrogenase (nadp) | SAMN05444679_110202 | Not Available | Negative | 3154089 - 3155348 | 45889.4 |
| hypothetical protein | SAMN05444679_110203 | Not Available | Positive | 3155541 - 3155858 | 10531.5 |
| hypothetical protein | SAMN05444679_110204 | Not Available | Positive | 3156013 - 3156465 | 16959.8 |
| superoxide dismutase, fe-mn family | SAMN05444679_110205 | Not Available | Negative | 3156526 - 3157107 | 21385.2 |
| exodeoxyribonuclease vii large subunit | SAMN05444679_110206 | Not Available | Negative | 3157155 - 3158465 | 47326.3 |
| biopolymer transport protein exbb | SAMN05444679_110207 | Not Available | Positive | 3158779 - 3159411 | 22421.5 |
| biopolymer transport protein exbd | SAMN05444679_110208 | Not Available | Positive | 3159408 - 3159842 | 15578.8 |
| lipid-a-disaccharide kinase | SAMN05444679_110209 | Not Available | Positive | 3159872 - 3160819 | 34153.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
