Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_110180 | Not Available | Positive | 3132502 - 3133575 | 39150.4 |
| hypothetical protein | SAMN05444679_110181 | Not Available | Negative | 3133578 - 3134219 | 22830.7 |
| rna polymerase, sigma subunit, ecf family | SAMN05444679_110182 | Not Available | Negative | 3134216 - 3134770 | 20372.4 |
| uncharacterized membrane protein | SAMN05444679_110183 | Not Available | Positive | 3134946 - 3135233 | 9478.54 |
| hypothetical protein | SAMN05444679_110184 | Not Available | Positive | 3135254 - 3136096 | 31015.6 |
| putative dna-binding domain-containing protein | SAMN05444679_110185 | Not Available | Positive | 3136093 - 3136854 | 27118.2 |
| putative oxidoreductase | SAMN05444679_110186 | Not Available | Positive | 3136851 - 3137336 | 17557.7 |
| gtp cyclohydrolase ii | SAMN05444679_110187 | Not Available | Positive | 3137472 - 3138782 | 47169.4 |
| protein of unknown function | SAMN05444679_110188 | Not Available | Positive | 3138779 - 3140188 | 50797.1 |
| uracil phosphoribosyltransferase | SAMN05444679_110189 | Not Available | Positive | 3140217 - 3140846 | 23033.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
