Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coenzyme a synthetase/amp-(fatty) acid ligase | SAMN05444679_110170 | Not Available | Negative | 3120990 - 3122678 | 59027.7 |
| uncharacterized membrane protein | SAMN05444679_110171 | Not Available | Negative | 3122675 - 3123298 | 22451.8 |
| acyl carrier protein | SAMN05444679_110172 | Not Available | Negative | 3123317 - 3123625 | 10947.9 |
| hypothetical protein | SAMN05444679_110173 | Not Available | Positive | 3123726 - 3125243 | 53819.4 |
| hypothetical protein | SAMN05444679_110174 | Not Available | Negative | 3125334 - 3125846 | 17766.3 |
| hypothetical protein | SAMN05444679_110175 | Not Available | Negative | 3125927 - 3128404 | 89812.0 |
| astacin (peptidase family m12a) | SAMN05444679_110176 | Not Available | Negative | 3128423 - 3129127 | 26400.1 |
| hypothetical protein | SAMN05444679_110177 | Not Available | Negative | 3129149 - 3129958 | 27620.2 |
| hypothetical protein | SAMN05444679_110178 | Not Available | Positive | 3130144 - 3131655 | 55235.4 |
| hypothetical protein | SAMN05444679_110179 | Not Available | Positive | 3131652 - 3132428 | 27083.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
