Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444679_110160 | Not Available | Positive | 3111681 - 3112712 | 36732.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferases | SAMN05444679_110161 | Not Available | Positive | 3112731 - 3113528 | 29571.8 |
| hypothetical protein | SAMN05444679_110162 | Not Available | Positive | 3113495 - 3114271 | 28885.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_110163 | Not Available | Negative | 3114272 - 3115003 | 25044.3 |
| predicted 3-hydroxylacyl-acp dehydratase, hotdog domain | SAMN05444679_110164 | Not Available | Negative | 3115000 - 3115470 | 16552.5 |
| methyltransferase domain-containing protein | SAMN05444679_110165 | Not Available | Negative | 3115467 - 3116222 | 27470.1 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05444679_110166 | Not Available | Negative | 3116219 - 3117058 | 30117.6 |
| predicted exporter | SAMN05444679_110167 | Not Available | Negative | 3117058 - 3119448 | 83621.0 |
| outer membrane lipoprotein-sorting protein | SAMN05444679_110168 | Not Available | Negative | 3119445 - 3120041 | 21573.1 |
| predicted acyltransferase, lplat superfamily | SAMN05444679_110169 | Not Available | Negative | 3120013 - 3120993 | 36642.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
