Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase a | SAMN05444679_101298 | Not Available | Negative | 276426 - 277742 | 48886.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_101299 | Not Available | Negative | 277751 - 278716 | 34205.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_101300 | Not Available | Negative | 278732 - 279718 | 35008.4 |
| dna-binding transcriptional regulator, marr family | SAMN05444679_101301 | Not Available | Positive | 279810 - 280301 | 17595.6 |
| small-conductance mechanosensitive channel | SAMN05444679_101302 | Not Available | Negative | 280298 - 281362 | 38872.1 |
| uncharacterized membrane protein yccc | SAMN05444679_101303 | Not Available | Negative | 281362 - 283596 | 80171.4 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05444679_101304 | Not Available | Negative | 283596 - 284621 | 36628.5 |
| trna/rrna methyltransferase | SAMN05444679_101305 | Not Available | Positive | 284710 - 285462 | 27395.0 |
| serine o-acetyltransferase | SAMN05444679_101306 | Not Available | Positive | 285498 - 286271 | 27402.1 |
| molybdopterin adenylyltransferase | SAMN05444679_101307 | Not Available | Negative | 286867 - 287463 | 21276.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
