Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily b, msba | SAMN05444679_110150 | Not Available | Positive | 3101446 - 3103329 | 68112.5 |
| rnase g | SAMN05444679_110151 | Not Available | Negative | 3103339 - 3104865 | 56245.9 |
| septum formation protein | SAMN05444679_110152 | Not Available | Negative | 3104870 - 3105475 | 21577.3 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN05444679_110153 | Not Available | Negative | 3105472 - 3105939 | 17265.9 |
| ribosome-associated protein | SAMN05444679_110154 | Not Available | Negative | 3105936 - 3106583 | 22899.5 |
| nicotinate-nucleotide adenylyltransferase | SAMN05444679_110155 | Not Available | Negative | 3106583 - 3107203 | 22264.8 |
| coproporphyrinogen oxidase | SAMN05444679_110156 | Not Available | Negative | 3107194 - 3108108 | 34403.9 |
| phosphoribosylamine--glycine ligase | SAMN05444679_110157 | Not Available | Negative | 3108108 - 3109403 | 46321.5 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN05444679_110158 | Not Available | Negative | 3109429 - 3110154 | 26067.7 |
| dehydrogenase (flavoprotein) | SAMN05444679_110159 | Not Available | Positive | 3110326 - 3111684 | 50712.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
