Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l3 glutamine methyltransferase | SAMN05444679_110140 | Not Available | Positive | 3093381 - 3094247 | 30830.8 |
| atp-binding cassette, subfamily f, member 3 | SAMN05444679_110141 | Not Available | Positive | 3094244 - 3096205 | 71682.6 |
| hypothetical protein | SAMN05444679_110142 | Not Available | Positive | 3096231 - 3096797 | 20099.8 |
| hypothetical protein | SAMN05444679_110143 | Not Available | Positive | 3096962 - 3097186 | 8198.53 |
| hypothetical protein | SAMN05444679_110144 | Not Available | Negative | 3097287 - 3097589 | 10885.5 |
| Trna-lys | Not Available | Not Available | Positive | 3097835 - 3097910 | Not Available |
| trna a37 threonylcarbamoyladenosine dehydratase | SAMN05444679_110146 | Not Available | Negative | 3097959 - 3098762 | 28118.6 |
| tol-pal system protein ybgf | SAMN05444679_110147 | Not Available | Negative | 3098786 - 3099520 | 27436.3 |
| peptidoglycan-associated lipoprotein | SAMN05444679_110148 | Not Available | Negative | 3099538 - 3100053 | 18205.5 |
| tolb protein | SAMN05444679_110149 | Not Available | Negative | 3100073 - 3101389 | 47001.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
