Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444679_110130 | Not Available | Negative | 3080774 - 3082183 | 49494.4 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_110131 | Not Available | Negative | 3082221 - 3083870 | 59708.8 |
| peptide/nickel transport system permease protein | SAMN05444679_110132 | Not Available | Negative | 3083881 - 3084753 | 30537.2 |
| peptide/nickel transport system permease protein | SAMN05444679_110133 | Not Available | Negative | 3084759 - 3085700 | 33844.6 |
| peptide/nickel transport system substrate-binding protein | SAMN05444679_110134 | Not Available | Negative | 3085719 - 3087344 | 59351.2 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05444679_110135 | Not Available | Positive | 3087521 - 3088936 | 51003.5 |
| succinyldiaminopimelate aminotransferase apoenzyme | SAMN05444679_110136 | Not Available | Positive | 3088945 - 3090150 | 43480.8 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN05444679_110137 | Not Available | Positive | 3090172 - 3090996 | 29286.1 |
| twitching motility protein pilu | SAMN05444679_110138 | Not Available | Positive | 3091042 - 3092190 | 41882.6 |
| succinyldiaminopimelate desuccinylase | SAMN05444679_110139 | Not Available | Positive | 3092206 - 3093384 | 42074.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
