Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sirohydrochlorin cobaltochelatase | SAMN05444679_110120 | Not Available | Positive | 3068521 - 3068889 | 12798.7 |
| lysr family transcriptional regulator, cys regulon transcriptional activator | SAMN05444679_110121 | Not Available | Positive | 3068953 - 3069894 | 34992.3 |
| methionine aminotransferase | SAMN05444679_110122 | Not Available | Positive | 3069891 - 3071051 | 41940.4 |
| protein of unknown function | SAMN05444679_110123 | Not Available | Positive | 3071161 - 3071319 | 5525.34 |
| atp-dependent helicase hrpa | SAMN05444679_110124 | Not Available | Negative | 3071378 - 3075253 | 143881.0 |
| n-acetylglutamate synthase | SAMN05444679_110125 | Not Available | Positive | 3075390 - 3076736 | 49348.4 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN05444679_110126 | Not Available | Negative | 3076723 - 3078216 | 52501.2 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN05444679_110127 | Not Available | Negative | 3078227 - 3079735 | 53195.8 |
| branched-chain amino acid transport protein | SAMN05444679_110128 | Not Available | Negative | 3079756 - 3080085 | 12117.0 |
| predicted branched-chain amino acid permease (azaleucine resistance) | SAMN05444679_110129 | Not Available | Negative | 3080082 - 3080774 | 24163.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
