Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN05444679_110110 | Not Available | Positive | 3060553 - 3061482 | 33594.6 |
| Trna-ser | Not Available | Not Available | Positive | 3061519 - 3061609 | Not Available |
| hypothetical protein | SAMN05444679_110112 | Not Available | Positive | 3061750 - 3062046 | 10509.1 |
| response regulator receiver domain-containing protein | SAMN05444679_110113 | Not Available | Positive | 3062181 - 3062561 | 14020.6 |
| branched-chain amino acid transport system substrate-binding protein | SAMN05444679_110114 | Not Available | Negative | 3062606 - 3063820 | 41764.1 |
| hypothetical protein | SAMN05444679_110115 | Not Available | Negative | 3063944 - 3064351 | 14448.3 |
| dna polymerase iii, chi subunit | SAMN05444679_110116 | Not Available | Negative | 3064351 - 3064788 | 15988.0 |
| aminopeptidase a. metallo peptidase. merops family m17 | SAMN05444679_110117 | Not Available | Negative | 3064785 - 3066287 | 51850.6 |
| lipopolysaccharide export system permease protein | SAMN05444679_110118 | Not Available | Positive | 3066309 - 3067406 | 40596.8 |
| lipopolysaccharide export system permease protein | SAMN05444679_110119 | Not Available | Positive | 3067403 - 3068512 | 41384.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
