Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate permease | SAMN05444679_110100 | Not Available | Negative | 3048433 - 3049638 | 41560.4 |
| microcin c transport system atp-binding protein | SAMN05444679_110101 | Not Available | Negative | 3049659 - 3051281 | 57724.1 |
| microcin c transport system permease protein | SAMN05444679_110102 | Not Available | Negative | 3051278 - 3052321 | 38564.3 |
| microcin c transport system permease protein | SAMN05444679_110103 | Not Available | Negative | 3052314 - 3053348 | 38305.5 |
| microcin c transport system substrate-binding protein | SAMN05444679_110104 | Not Available | Negative | 3053358 - 3055154 | 66820.4 |
| enoyl-[acyl-carrier-protein] reductase | SAMN05444679_110105 | Not Available | Positive | 3055192 - 3055986 | 27861.4 |
| dna ligase-1 | SAMN05444679_110106 | Not Available | Positive | 3056069 - 3056986 | 33476.1 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05444679_110107 | Not Available | Negative | 3057011 - 3057568 | 18739.9 |
| ornithine decarboxylase | SAMN05444679_110108 | Not Available | Negative | 3057689 - 3059986 | 86080.6 |
| membrane protein implicated in regulation of membrane protease activity | SAMN05444679_110109 | Not Available | Positive | 3060097 - 3060522 | 14749.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
