Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transmembrane transcriptional regulator (anti-sigma factor rsiw) | SAMN05444679_11090 | Not Available | Positive | 3037384 - 3038106 | 26168.1 |
| predicted lipoprotein with conserved yx(fwy)xxd motif | SAMN05444679_11091 | Not Available | Positive | 3038180 - 3038569 | 13634.3 |
| yxwgxw repeat-containing protein | SAMN05444679_11092 | Not Available | Negative | 3038573 - 3039001 | 15920.6 |
| threonine/homoserine efflux transporter rhta | SAMN05444679_11093 | Not Available | Negative | 3039073 - 3039942 | 30601.4 |
| gtp-binding protein | SAMN05444679_11094 | Not Available | Negative | 3039977 - 3041809 | 67288.9 |
| trna pseudouridine55 synthase | SAMN05444679_11095 | Not Available | Negative | 3041806 - 3042789 | 34738.6 |
| ribosome-binding factor a | SAMN05444679_11096 | Not Available | Negative | 3042828 - 3043199 | 13712.5 |
| translation initiation factor if-2 | SAMN05444679_11097 | Not Available | Negative | 3043221 - 3046136 | 103899.0 |
| nusa antitermination factor | SAMN05444679_11098 | Not Available | Negative | 3046161 - 3047645 | 55070.6 |
| ribosome maturation factor rimp | SAMN05444679_11099 | Not Available | Negative | 3047663 - 3048271 | 21894.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
