Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11080 | Not Available | Positive | 3030015 - 3030266 | 8510.93 |
| hypothetical protein | SAMN05444679_11081 | Not Available | Negative | 3030156 - 3030704 | 20168.0 |
| gmp synthase (glutamine-hydrolysing) | SAMN05444679_11082 | Not Available | Negative | 3031013 - 3032626 | 58969.1 |
| imp dehydrogenase | SAMN05444679_11083 | Not Available | Negative | 3032637 - 3034106 | 51592.3 |
| hypothetical protein | SAMN05444679_11084 | Not Available | Positive | 3034256 - 3034774 | 18508.9 |
| hypothetical protein | SAMN05444679_11085 | Not Available | Negative | 3034901 - 3035233 | 12227.8 |
| ribosome association toxin past (rata) of the ratab toxin-antitoxin module | SAMN05444679_11086 | Not Available | Negative | 3035233 - 3035679 | 16591.8 |
| ssra-binding protein | SAMN05444679_11087 | Not Available | Positive | 3035742 - 3036218 | 18129.0 |
| putative colanic acid biosynthesis acetyltransferase wcaf | SAMN05444679_11088 | Not Available | Positive | 3036229 - 3036804 | 20811.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444679_11089 | Not Available | Positive | 3036857 - 3037366 | 19110.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
