Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11060 | Not Available | Negative | 3012609 - 3013412 | 29491.3 |
| subtilisin | SAMN05444679_11061 | Not Available | Negative | 3013434 - 3014711 | 43783.9 |
| serine/threonine-protein kinase hipa | SAMN05444679_11062 | Not Available | Negative | 3014964 - 3016232 | 46458.2 |
| helix-turn-helix domain-containing protein | SAMN05444679_11063 | Not Available | Negative | 3016237 - 3016926 | 24862.4 |
| hypothetical protein | SAMN05444679_11064 | Not Available | Negative | 3017111 - 3017305 | 6533.92 |
| helix-turn-helix | SAMN05444679_11065 | Not Available | Negative | 3017302 - 3017670 | 13520.1 |
| hypothetical protein | SAMN05444679_11066 | Not Available | Negative | 3017667 - 3017981 | 11068.5 |
| transcriptional regulator, abiei antitoxin, type iv ta system | SAMN05444679_11067 | Not Available | Positive | 3018174 - 3018770 | 20951.8 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN05444679_11068 | Not Available | Positive | 3018763 - 3019773 | 36613.0 |
| transcriptional regulator, tetr family | SAMN05444679_11069 | Not Available | Negative | 3020011 - 3020643 | 22343.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
