Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_101288 | Not Available | Negative | 267627 - 268088 | 16613.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_101289 | Not Available | Negative | 268210 - 269013 | 29953.3 |
| putative proteasome-type protease | SAMN05444679_101290 | Not Available | Negative | 269019 - 269846 | 30826.9 |
| dna mismatch repair protein muts | SAMN05444679_101291 | Not Available | Negative | 269871 - 272504 | 94887.7 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN05444679_101292 | Not Available | Negative | 272501 - 272896 | 14589.6 |
| looped-hinge helix dna binding domain-containing protein, abrb family | SAMN05444679_101293 | Not Available | Negative | 272896 - 273108 | 7864.47 |
| hypothetical protein | SAMN05444679_101294 | Not Available | Negative | 273227 - 273742 | 19447.7 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN05444679_101295 | Not Available | Negative | 273856 - 274695 | 30309.8 |
| transcriptional regulator, padr family | SAMN05444679_101296 | Not Available | Negative | 274836 - 275390 | 19965.0 |
| transcriptional regulator, arac family | SAMN05444679_101297 | Not Available | Positive | 275466 - 276425 | 35645.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
