Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_10118 | Not Available | Negative | 13201 - 13848 | 23950.8 |
| aldo/keto reductase | SAMN05444679_10119 | Not Available | Negative | 13848 - 14762 | 33624.9 |
| hypothetical protein | SAMN05444679_10120 | Not Available | Negative | 14802 - 17201 | 85506.9 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05444679_10121 | Not Available | Negative | 17209 - 17952 | 26410.3 |
| protein of unknown function | SAMN05444679_10122 | Not Available | Positive | 18157 - 21375 | 107677.0 |
| cupin-like domain-containing protein | SAMN05444679_10123 | Not Available | Negative | 21468 - 22583 | 41505.4 |
| hypothetical protein | SAMN05444679_10124 | Not Available | Negative | 22806 - 23006 | 7091.69 |
| predicted rna-binding protein, contains pua-like domain | SAMN05444679_10125 | Not Available | Negative | 23044 - 23508 | 17182.8 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444679_10126 | Not Available | Negative | 23516 - 24154 | 22001.5 |
| adenosine deaminase | SAMN05444679_10127 | Not Available | Negative | 24211 - 25269 | 36802.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
