Variovorax sp. CF079

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. CF079 is a rod-shaped bacterium characterized by a single replicon, indicating a streamlined genetic structure. The organism is cataloged under the accession number FMZU00000000.1, which serves as a reference for further research and identification. This bacterium belongs to the genus Variovorax, which is known for its versatility and ability to thrive in diverse environments. Members of the Variovorax genus are often studied for their roles in bioremediation and microbial ecology, particularly due to their capacity to degrade various organic compounds. The single replicon in Variovorax sp. CF079 suggests a potential efficiency in replication and genetic stability, which may contribute to its adaptability in fluctuating environmental conditions. Additionally, the rod shape of this bacterium can influence its motility and interaction with surrounding substrates, potentially enhancing its ability to colonize different niches. Understanding the traits of Variovorax sp. CF079 can provide insights into its ecological role, particularly in nutrient cycling and the degradation of pollutants. As a member of a genus known for its metabolic versatility, Variovorax sp. CF079 may play a significant role in ecosystem health, particularly in environments impacted by human activity. Further research could elucidate its specific functions and applications in bioremediation efforts, highlighting the importance of microbial diversity in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. CF079
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. CF079


Gene Summary

Adenine Count

1129990 bp

Thymine Count

1131182 bp

Guanine Count

2291305 bp

Cytosine Count

2293904 bp

Genome Length

6847006 bp

Protein-coding Genes

6686 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05444679_10118Not AvailableNegative13201 - 1384823950.8
aldo/keto reductaseSAMN05444679_10119Not AvailableNegative13848 - 1476233624.9
hypothetical proteinSAMN05444679_10120Not AvailableNegative14802 - 1720185506.9
protein-l-isoaspartate(d-aspartate) o-methyltransferaseSAMN05444679_10121Not AvailableNegative17209 - 1795226410.3
protein of unknown functionSAMN05444679_10122Not AvailablePositive18157 - 21375107677.0
cupin-like domain-containing proteinSAMN05444679_10123Not AvailableNegative21468 - 2258341505.4
hypothetical proteinSAMN05444679_10124Not AvailableNegative22806 - 230067091.69
predicted rna-binding protein, contains pua-like domainSAMN05444679_10125Not AvailableNegative23044 - 2350817182.8
threonine/homoserine/homoserine lactone efflux proteinSAMN05444679_10126Not AvailableNegative23516 - 2415422001.5
adenosine deaminaseSAMN05444679_10127Not AvailableNegative24211 - 2526936802.5

Displaying genes 21 – 30 of 6752 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.