Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11040 | Not Available | Positive | 2991448 - 2992437 | 34846.1 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05444679_11041 | Not Available | Positive | 2992476 - 2993612 | 42058.1 |
| hypothetical protein | SAMN05444679_11042 | Not Available | Positive | 2993628 - 2994158 | 19302.3 |
| tetratricopeptide repeat-containing protein | SAMN05444679_11043 | Not Available | Positive | 2994180 - 2994665 | 17731.3 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444679_11044 | Not Available | Negative | 2994672 - 2995568 | 31290.6 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_11045 | Not Available | Negative | 2995595 - 2996335 | 25076.1 |
| transcriptional regulator, lysr family | SAMN05444679_11046 | Not Available | Positive | 2996487 - 2997380 | 33502.3 |
| 2'-5' rna ligase | SAMN05444679_11047 | Not Available | Negative | 2997390 - 2997977 | 21233.9 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_11048 | Not Available | Negative | 2997977 - 2999320 | 47660.1 |
| cytochrome o ubiquinol oxidase subunit 2 | SAMN05444679_11049 | Not Available | Positive | 2999493 - 3000551 | 38550.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
