Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_11030 | Not Available | Negative | 2979194 - 2979883 | 25339.0 |
| urea transport system atp-binding protein | SAMN05444679_11031 | Not Available | Negative | 2979897 - 2980643 | 27492.5 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444679_11032 | Not Available | Negative | 2980653 - 2981858 | 43531.2 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_11033 | Not Available | Negative | 2981869 - 2982783 | 32483.6 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_11034 | Not Available | Negative | 2982911 - 2984173 | 45823.9 |
| signal transduction histidine kinase | SAMN05444679_11035 | Not Available | Positive | 2984415 - 2987795 | 123131.0 |
| two component transcriptional regulator, luxr family | SAMN05444679_11036 | Not Available | Positive | 2987779 - 2988672 | 31024.6 |
| uncharacterized conserved protein yece, duf72 family | SAMN05444679_11037 | Not Available | Positive | 2988686 - 2989762 | 38568.2 |
| transcriptional regulator, tetr family | SAMN05444679_11038 | Not Available | Negative | 2989727 - 2990317 | 21543.0 |
| hypothetical protein | SAMN05444679_11039 | Not Available | Positive | 2990429 - 2991451 | 35779.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
