Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11020 | Not Available | Negative | 2969991 - 2970185 | 6744.31 |
| negative transcriptional regulator, paib family | SAMN05444679_11021 | Not Available | Negative | 2970187 - 2970831 | 24036.7 |
| ankyrin repeat-containing protein | SAMN05444679_11022 | Not Available | Negative | 2970894 - 2971205 | 10642.0 |
| uncharacterized conserved protein glcg, duf336 family | SAMN05444679_11023 | Not Available | Negative | 2971211 - 2971726 | 16903.2 |
| two component transcriptional regulator, luxr family | SAMN05444679_11024 | Not Available | Negative | 2971844 - 2972467 | 22598.4 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05444679_11025 | Not Available | Negative | 2972464 - 2973924 | 53252.1 |
| amidase | SAMN05444679_11026 | Not Available | Negative | 2973958 - 2975001 | 38450.8 |
| beta-glucosidase | SAMN05444679_11027 | Not Available | Positive | 2975148 - 2977421 | 80926.8 |
| putative regulatory protein, fmdb family | SAMN05444679_11028 | Not Available | Negative | 2977428 - 2977769 | 12153.3 |
| formamidase | SAMN05444679_11029 | Not Available | Negative | 2977784 - 2979016 | 44606.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
