Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_109254 | Not Available | Positive | 2952816 - 2952964 | 6076.69 |
| hypothetical protein | SAMN05444679_1101 | Not Available | Negative | 2952965 - 2953071 | 3758.58 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_1102 | Not Available | Negative | 2953080 - 2954042 | 33476.4 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05444679_1103 | Not Available | Negative | 2954048 - 2955070 | 37183.1 |
| gluconate 5-dehydrogenase | SAMN05444679_1104 | Not Available | Negative | 2955108 - 2955875 | 26781.2 |
| mannonate dehydratase | SAMN05444679_1105 | Not Available | Negative | 2955887 - 2957134 | 46298.5 |
| transcriptional regulator, gntr family | SAMN05444679_1106 | Not Available | Positive | 2957286 - 2958131 | 31706.0 |
| dna-binding transcriptional regulator, marr family | SAMN05444679_1107 | Not Available | Positive | 2958217 - 2958687 | 17401.3 |
| non-heme chloroperoxidase | SAMN05444679_1108 | Not Available | Positive | 2958837 - 2959799 | 34286.9 |
| aspartyl protease | SAMN05444679_1109 | Not Available | Positive | 2959961 - 2960575 | 21568.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
