Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase, alpha chain c terminal domain | SAMN05444679_109234 | Not Available | Negative | 2933457 - 2933729 | 9876.93 |
| hypothetical protein | SAMN05444679_109235 | Not Available | Positive | 2934053 - 2934439 | 13816.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_109236 | Not Available | Positive | 2934673 - 2935452 | 29693.3 |
| protein of unknown function | SAMN05444679_109237 | Not Available | Negative | 2935499 - 2935891 | 12989.2 |
| catechol 2,3-dioxygenase | SAMN05444679_109238 | Not Available | Negative | 2935933 - 2936331 | 14643.2 |
| hypothetical protein | SAMN05444679_109239 | Not Available | Positive | 2936388 - 2936729 | 11970.4 |
| transcriptional regulator, lysr family | SAMN05444679_109240 | Not Available | Negative | 2936624 - 2937532 | 32954.7 |
| putative tricarboxylic transport membrane protein | SAMN05444679_109241 | Not Available | Positive | 2937648 - 2938625 | 34018.5 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05444679_109242 | Not Available | Positive | 2938636 - 2940063 | 50526.4 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN05444679_109243 | Not Available | Positive | 2940066 - 2940659 | 21320.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
