Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite reductase (nadph) flavoprotein alpha-component | SAMN05444679_109224 | Not Available | Positive | 2923218 - 2925653 | 88347.0 |
| molybdate transport system substrate-binding protein | SAMN05444679_109225 | Not Available | Negative | 2925660 - 2926319 | 22419.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_109226 | Not Available | Negative | 2926389 - 2927369 | 33731.3 |
| gallate dioxygenase | SAMN05444679_109227 | Not Available | Negative | 2927366 - 2928652 | 47602.8 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase | SAMN05444679_109228 | Not Available | Negative | 2928663 - 2929355 | 24320.5 |
| 4-oxalomesaconate hydratase | SAMN05444679_109229 | Not Available | Negative | 2929358 - 2930386 | 38672.1 |
| transcriptional regulator, lysr family | SAMN05444679_109230 | Not Available | Positive | 2930535 - 2931824 | 46512.3 |
| hypothetical protein | SAMN05444679_109231 | Not Available | Negative | 2931838 - 2932101 | 9687.55 |
| hypothetical protein | SAMN05444679_109232 | Not Available | Positive | 2932420 - 2932584 | 6018.33 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444679_109233 | Not Available | Negative | 2932812 - 2933300 | 17218.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
