Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase yags fad-binding subunit | SAMN05444679_109214 | Not Available | Positive | 2911613 - 2912563 | 33274.9 |
| xanthine dehydrogenase yagr molybdenum-binding subunit | SAMN05444679_109215 | Not Available | Positive | 2912567 - 2914777 | 77832.3 |
| cupin domain protein | SAMN05444679_109216 | Not Available | Positive | 2914799 - 2915272 | 16835.9 |
| 4-carboxymuconolactone decarboxylase | SAMN05444679_109217 | Not Available | Positive | 2915296 - 2915715 | 14618.6 |
| hypothetical protein | SAMN05444679_109218 | Not Available | Negative | 2915807 - 2916094 | 10641.6 |
| gluconolactonase | SAMN05444679_109219 | Not Available | Positive | 2916359 - 2917585 | 44026.8 |
| predicted metal-binding membrane protein | SAMN05444679_109220 | Not Available | Negative | 2917819 - 2918598 | 27725.3 |
| hypothetical protein | SAMN05444679_109221 | Not Available | Negative | 2918647 - 2919279 | 22801.3 |
| protein n-acetyltransferase, rimj/riml family | SAMN05444679_109222 | Not Available | Negative | 2919809 - 2920792 | 35434.6 |
| iron complex outermembrane recepter protein | SAMN05444679_109223 | Not Available | Positive | 2921083 - 2923197 | 76232.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
