Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, multidrug efflux system | SAMN05444679_101278 | Not Available | Positive | 251731 - 253014 | 45112.0 |
| multidrug efflux pump | SAMN05444679_101279 | Not Available | Positive | 253029 - 256154 | 110862.0 |
| multidrug efflux pump | SAMN05444679_101280 | Not Available | Positive | 256204 - 259461 | 116070.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444679_101281 | Not Available | Positive | 259469 - 260899 | 50021.6 |
| hypothetical protein | SAMN05444679_101282 | Not Available | Positive | 261120 - 262799 | 61632.1 |
| transcriptional regulator, rpir family | SAMN05444679_101283 | Not Available | Negative | 262824 - 263747 | 33226.8 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMN05444679_101284 | Not Available | Positive | 263818 - 265146 | 47260.8 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_101285 | Not Available | Positive | 265176 - 266081 | 32905.8 |
| hypothetical protein | SAMN05444679_101286 | Not Available | Positive | 266091 - 266732 | 22278.0 |
| undecaprenyl-diphosphatase | SAMN05444679_101287 | Not Available | Positive | 266786 - 267610 | 29653.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
