Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylcitrate dehydratase prpd | SAMN05444679_109204 | Not Available | Negative | 2901884 - 2903254 | 48353.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_109205 | Not Available | Negative | 2903304 - 2904275 | 34605.9 |
| dna-binding transcriptional regulator, gntr family | SAMN05444679_109206 | Not Available | Negative | 2904318 - 2905010 | 25353.8 |
| formyl-coa transferase | SAMN05444679_109207 | Not Available | Positive | 2905144 - 2906334 | 43415.0 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444679_109208 | Not Available | Positive | 2906334 - 2907143 | 29171.0 |
| nadph:quinone reductase | SAMN05444679_109209 | Not Available | Positive | 2907171 - 2908157 | 34321.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_109210 | Not Available | Positive | 2908186 - 2909157 | 33601.6 |
| transcriptional regulator, gntr family | SAMN05444679_109211 | Not Available | Positive | 2909208 - 2909870 | 24786.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_109212 | Not Available | Negative | 2909892 - 2910860 | 35247.8 |
| xanthine dehydrogenase yagt iron-sulfur-binding subunit | SAMN05444679_109213 | Not Available | Positive | 2910978 - 2911616 | 21893.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
