Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444679_109194 | Not Available | Negative | 2891590 - 2892444 | 31626.1 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444679_109195 | Not Available | Negative | 2892524 - 2893852 | 48495.5 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444679_109196 | Not Available | Negative | 2893898 - 2894971 | 38945.1 |
| gntr family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex | SAMN05444679_109197 | Not Available | Positive | 2895102 - 2895902 | 29010.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444679_109198 | Not Available | Positive | 2895899 - 2896915 | 35823.1 |
| galactonate dehydratase | SAMN05444679_109199 | Not Available | Positive | 2896915 - 2898729 | 65474.0 |
| yihy family inner membrane protein | SAMN05444679_109200 | Not Available | Negative | 2898743 - 2899567 | 29954.6 |
| phosphonate metabolism protein phnm | SAMN05444679_109201 | Not Available | Positive | 2899801 - 2900142 | 11957.5 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_109202 | Not Available | Negative | 2900139 - 2900954 | 28164.0 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05444679_109203 | Not Available | Negative | 2900954 - 2901829 | 30556.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
