Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444679_109174 | Not Available | Negative | 2874183 - 2874623 | 16159.5 |
| merr family transcriptional regulator, redox-sensitive transcriptional activator soxr | SAMN05444679_109175 | Not Available | Positive | 2874699 - 2875178 | 17400.0 |
| hypothetical protein | SAMN05444679_109176 | Not Available | Negative | 2875189 - 2875416 | 8099.81 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_109177 | Not Available | Negative | 2875526 - 2876737 | 41144.2 |
| transcriptional regulator, tetr family | SAMN05444679_109178 | Not Available | Positive | 2876825 - 2877454 | 22725.3 |
| hypothetical protein | SAMN05444679_109179 | Not Available | Negative | 2877479 - 2877868 | 14295.3 |
| hypothetical protein | SAMN05444679_109180 | Not Available | Positive | 2877949 - 2878578 | 22635.1 |
| lipid-binding sylf domain-containing protein | SAMN05444679_109181 | Not Available | Negative | 2878575 - 2879159 | 20056.8 |
| hypothetical protein | SAMN05444679_109182 | Not Available | Negative | 2879276 - 2879464 | 6685.91 |
| hypothetical protein | SAMN05444679_109183 | Not Available | Negative | 2879521 - 2879949 | 15260.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
