Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | SAMN05444679_109164 | Not Available | Negative | 2863726 - 2864532 | 28275.5 |
| hydroxyquinol 1,2-dioxygenase | SAMN05444679_109165 | Not Available | Negative | 2864567 - 2865454 | 32158.9 |
| transcriptional regulator, lysr family | SAMN05444679_109166 | Not Available | Positive | 2865562 - 2866470 | 33089.6 |
| hypothetical protein | SAMN05444679_109167 | Not Available | Negative | 2866564 - 2867448 | 32680.2 |
| cyclic nucleotide-binding domain-containing protein | SAMN05444679_109168 | Not Available | Negative | 2867532 - 2868227 | 25205.2 |
| membrane protein deda, snare-associated domain | SAMN05444679_109169 | Not Available | Negative | 2868324 - 2868851 | 18890.3 |
| isocitrate dehydrogenase | SAMN05444679_109170 | Not Available | Negative | 2868986 - 2871223 | 82322.2 |
| transcriptional regulatory protein, c terminal | SAMN05444679_109171 | Not Available | Negative | 2871406 - 2871927 | 18688.6 |
| tripartite tricarboxylate transporter tctb family protein | SAMN05444679_109172 | Not Available | Positive | 2872151 - 2872573 | 15189.4 |
| tcta family transporter | SAMN05444679_109173 | Not Available | Positive | 2872573 - 2874078 | 53179.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
