Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, marr family | SAMN05444679_109154 | Not Available | Positive | 2853797 - 2854309 | 18800.0 |
| nudix domain-containing protein | SAMN05444679_109155 | Not Available | Positive | 2854519 - 2854971 | 16419.6 |
| hypothetical protein | SAMN05444679_109156 | Not Available | Positive | 2854985 - 2855599 | 21944.8 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | SAMN05444679_109157 | Not Available | Negative | 2855977 - 2857002 | 37842.2 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_109158 | Not Available | Negative | 2857026 - 2857730 | 25252.1 |
| amino acid/amide abc transporter membrane protein 2, haat family /amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444679_109159 | Not Available | Negative | 2857723 - 2859471 | 61384.8 |
| branched-chain amino acid transport system permease protein | SAMN05444679_109160 | Not Available | Negative | 2859471 - 2860337 | 30117.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_109161 | Not Available | Negative | 2860339 - 2861553 | 43456.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_109162 | Not Available | Negative | 2861601 - 2862566 | 33399.7 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_109163 | Not Available | Negative | 2862593 - 2863729 | 41868.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
