Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_109134 | Not Available | Negative | 2833390 - 2833674 | 10740.8 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05444679_109135 | Not Available | Negative | 2833681 - 2834439 | 27922.9 |
| zinc carboxypeptidase | SAMN05444679_109136 | Not Available | Negative | 2834436 - 2835461 | 38803.2 |
| hypothetical protein | SAMN05444679_109137 | Not Available | Positive | 2835545 - 2835676 | 4802.88 |
| phnb protein | SAMN05444679_109138 | Not Available | Negative | 2835690 - 2836115 | 15113.1 |
| hypothetical protein | SAMN05444679_109139 | Not Available | Negative | 2836163 - 2836570 | 14949.8 |
| transcriptional regulator, tetr family | SAMN05444679_109140 | Not Available | Positive | 2836668 - 2837324 | 22945.6 |
| dna-3-methyladenine glycosylase | SAMN05444679_109141 | Not Available | Positive | 2837330 - 2838010 | 24070.2 |
| amino acid adenylation domain-containing protein | SAMN05444679_109142 | Not Available | Negative | 2837955 - 2843210 | 189830.0 |
| hypothetical protein | SAMN05444679_109143 | Not Available | Negative | 2843354 - 2843893 | 19464.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
