Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted abc-type atpase | SAMN05444679_109124 | Not Available | Positive | 2821306 - 2821905 | 22110.7 |
| xaa-pro aminopeptidase | SAMN05444679_109125 | Not Available | Negative | 2821902 - 2823287 | 51348.9 |
| hypothetical protein | SAMN05444679_109126 | Not Available | Positive | 2823540 - 2825402 | 65652.5 |
| hypothetical protein | SAMN05444679_109127 | Not Available | Positive | 2825694 - 2828261 | 87778.9 |
| murnac alpha-1-phosphate uridylyltransferase | SAMN05444679_109128 | Not Available | Negative | 2828287 - 2829003 | 25214.4 |
| s-adenosylmethionine decarboxylase | SAMN05444679_109129 | Not Available | Negative | 2829015 - 2829407 | 13666.4 |
| transketolase | SAMN05444679_109130 | Not Available | Positive | 2829511 - 2831562 | 73680.9 |
| glyceraldehyde-3-phosphate dehydrogenase (nad+) | SAMN05444679_109131 | Not Available | Positive | 2831608 - 2832609 | 36221.6 |
| hypothetical protein | SAMN05444679_109132 | Not Available | Negative | 2832658 - 2832909 | 8887.77 |
| quinol monooxygenase ygin | SAMN05444679_109133 | Not Available | Negative | 2832999 - 2833307 | 11075.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
