Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_109114 | Not Available | Negative | 2811035 - 2811124 | 3122.8 |
| barstar (barnase inhibitor) | SAMN05444679_109115 | Not Available | Negative | 2811235 - 2811720 | 18422.9 |
| ribonuclease t1 | SAMN05444679_109116 | Not Available | Negative | 2811717 - 2812130 | 15209.1 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN05444679_109117 | Not Available | Negative | 2812311 - 2814650 | 84447.6 |
| membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domain | SAMN05444679_109118 | Not Available | Positive | 2814807 - 2815856 | 37671.6 |
| protein of unknown function | SAMN05444679_109119 | Not Available | Positive | 2815934 - 2817412 | 53137.5 |
| protein of unknown function | SAMN05444679_109120 | Not Available | Positive | 2817434 - 2817655 | 7984.15 |
| spermidine synthase | SAMN05444679_109121 | Not Available | Positive | 2817738 - 2819294 | 56785.6 |
| monoamine oxidase | SAMN05444679_109122 | Not Available | Positive | 2819367 - 2820890 | 55202.6 |
| pard-like antitoxin of type ii toxin-antitoxin system | SAMN05444679_109123 | Not Available | Positive | 2820938 - 2821306 | 12729.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
