Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinol monooxygenase ygin | SAMN05444679_101268 | Not Available | Positive | 242115 - 242402 | 10253.4 |
| type i restriction enzyme, s subunit | SAMN05444679_101269 | Not Available | Negative | 242399 - 243607 | 44707.2 |
| type i restriction enzyme m protein | SAMN05444679_101270 | Not Available | Negative | 243604 - 245271 | 61798.5 |
| predicted deacylase | SAMN05444679_101271 | Not Available | Positive | 245402 - 246340 | 34174.9 |
| glutaminyl-trna synthetase | SAMN05444679_101272 | Not Available | Negative | 246355 - 248148 | 66762.6 |
| hypothetical protein | SAMN05444679_101273 | Not Available | Positive | 248286 - 248660 | 13493.8 |
| two component transcriptional regulator, lyttr family | SAMN05444679_101274 | Not Available | Negative | 248738 - 249571 | 30237.5 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05444679_101275 | Not Available | Negative | 249568 - 250632 | 38252.0 |
| 2tm domain-containing protein | SAMN05444679_101276 | Not Available | Negative | 250629 - 250919 | 10895.3 |
| hypothetical protein | SAMN05444679_101277 | Not Available | Negative | 250960 - 251493 | 18756.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
