Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein | SAMN05444679_10984 | Not Available | Negative | 2780874 - 2782253 | 51557.2 |
| lsu ribosomal protein l34p | SAMN05444679_10985 | Not Available | Positive | 2782557 - 2782691 | 5110.49 |
| ribonuclease p protein component | SAMN05444679_10986 | Not Available | Positive | 2782767 - 2783153 | 14106.1 |
| hypothetical protein | SAMN05444679_10987 | Not Available | Positive | 2783150 - 2783440 | 10583.8 |
| protein translocase subunit yidc | SAMN05444679_10988 | Not Available | Positive | 2783437 - 2785116 | 61739.1 |
| trna modification gtpase | SAMN05444679_10989 | Not Available | Positive | 2785186 - 2786592 | 49562.4 |
| cyclic nucleotide-binding domain-containing protein | SAMN05444679_10990 | Not Available | Positive | 2786678 - 2787145 | 16839.4 |
| zinc-ribbon domain-containing protein | SAMN05444679_10991 | Not Available | Positive | 2787172 - 2788119 | 31427.7 |
| kef-type potassium/proton antiporter, cpa2 family | SAMN05444679_10992 | Not Available | Negative | 2788145 - 2790130 | 71538.0 |
| arabinose-5-phosphate isomerase | SAMN05444679_10993 | Not Available | Positive | 2790199 - 2791200 | 34599.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
