Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444679_10964 | Not Available | Positive | 2761887 - 2763161 | 46546.0 |
| putative spermidine/putrescine transport system permease protein | SAMN05444679_10965 | Not Available | Positive | 2763268 - 2764170 | 33152.6 |
| putative spermidine/putrescine transport system permease protein | SAMN05444679_10966 | Not Available | Positive | 2764172 - 2765062 | 31572.3 |
| asp/glu/hydantoin racemase | SAMN05444679_10967 | Not Available | Positive | 2765062 - 2765808 | 25209.2 |
| hypothetical protein | SAMN05444679_10968 | Not Available | Positive | 2765832 - 2766740 | 33086.4 |
| ltxxq motif family protein | SAMN05444679_10969 | Not Available | Positive | 2766789 - 2768546 | 64537.6 |
| hypothetical protein | SAMN05444679_10970 | Not Available | Negative | 2768610 - 2768966 | 12562.7 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444679_10971 | Not Available | Positive | 2769218 - 2769946 | 27156.9 |
| cardiolipin synthase | SAMN05444679_10972 | Not Available | Positive | 2769949 - 2771178 | 46582.1 |
| hypothetical protein | SAMN05444679_10973 | Not Available | Positive | 2771175 - 2772137 | 34915.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
